Research 2010

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Faculty of Natural and Agricultural Sciences
Department of Microbiology and Plant Pathology
Research articles in refereed specialist journals

Journal Title

Instructions

Select the first letter of the journal title from the alphabetical list.

A

Shikongo-Nambabi MNNN, Chimwamurombe PM, Venter SN: 2010. Factors impacting on the microbiological quality and safety of processed hake. African Journal of Biotechnology, 9 (49) / Dec, pp 8405-8411, Full Text

Gumbo JR, Gumbo JR, Ross G, Cloete TE: 2010. The isolation and identification of predatory bacteria from a Microcystis algal bloom. African Journal of Biotechnology, 9 (5), pp 663-671.

Molobela I P, Cloete TE, Beukes M: 2010. Protease and amylase enzymes for biofilm removal and degradation of extracellular polymeric substances (EPS) produced by Pseudomonas fluorescens bacteria. African Journal of Microbiology Research, 4 (14) / July, pp 1515-1524, Full Text

Chungu D, Muimba-Kankolongo A, Wingfield MJ, Roux J: 2010. Plantation forestry diseases in Zambia: Contributing factors and management options. Annals of Forest Science, 67, pp 802-810, Full Text

Begoude ADB, Gryzenhout M, Wingfield MJ, Roux J: 2010. Aurifilum, a new fungal genus in the Cryphonectriaceae from Terminaliaspecies in Cameroon. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology, 98 (3) / Oct, pp 263-278, Full Text

Jooste AEC, Maree HJ, Bellstedt DU, Goszczynski DE, Pietersen G, Burger JT: 2010. Three genetic grapevine leafroll-associated virus 3 variants identified from South African vineyard show high variability in their 5'UTR.. Archives of Virology, 155 (12) / Dec, pp 1997-2006.

Gryzenhout M, Vermeulen M, Dick M, Wingfield MJ: 2010. The Eucalyptus canker pathogen Holocryphia eucalypti on Eucalyptus in New Zealand. Australasian Plant Disease Notes, 5, pp 5-8, Full Text

Gryzenhout M, Tarigan M, Clegg PA, Wingfield MJ: 2010. Cryptometrion aestuescens gen. sp. nov. (Cryphonectriaceae) pathogenic to Eucalyptus in Indonesia. Australasian Plant Pathology, 39, pp 161-169, Full Text

B

Arrebola E, Sivakumar D, Korsten L: 2010. Effect of volatile compounds produced by Bacillus strains on postharvest decay in citrus. Biological Control, 53, pp 122-128.

C

Theron J, Cloete TE, Kwaadsteniet M: 2010. Current molecular and emerging nanobiotechnology approaches for the detection of Microbial Pathogens. Critical Reviews in Microbiology, 36 (4) / November, pp 318-339.

Arrebola E, Sivakumar D, Bacigalupo R, Korsten L: 2010. Combined application of antagonist Bacillus amyloliquefaciens and essential oils for the control of peach postharvest diseases. Crop Protection, 29 (4) / Apr, pp 369-377, Full Text

Nkuekam GK, Solheim H, de Beer ZW, Grobbelaar JW, Jacobs K, Wingfield MJ, Roux J: 2010. Ophiostoma species, including Ophiostoma borealis sp. nov., infecting wounds of native broad-leaved trees in Norway. Cryptogamie Mycologie, 31 (3), pp 285-303, Full Text

E

Kuzmin IV, Niezgoda M, Franka R, Agwanda B, Markotter W, Breiman RF, Shieh Prof, Zaki SR, Rupprecht CE: 2010. Marburg virus in fruit bat, Kenya.. Emerging Infectious Diseases, 16 (2) / February, pp 352-354, Full Text

van der Merwe JJ, Coutinho TA, Korsten L, van der Waals (Smith) JE: 2010. Pectobacterium carotovorum subsp.brasiliensis causing blackleg on potatoes in South Africa. European Journal of Plant Pathology, 126 (2), pp 175-185.

F

Sivakumar D, Terry LA, Korsten L: 2010. An Overview on Litchi Fruit Quality and Alternative Postharvest Treatments to Replace Sulfur Dioxide Fumigation. Food Reviews International, 26, pp 162-188.

Sivakumar D, Korsten L: 2010. Fruit quality and physiological responses of litchi cultivar McLean's Red to 1-methylcyclopropene pre-treatment and controlled atmosphere storage conditions. Food Science and Technology International, 43, pp 942-948.

Heath RN, van der Linde MJ, Groeneveld HT, Wingfield BD, Wingfield MJ, Roux J: 2010. Factors influencing infection of Acacia mearnsii by the wilt pathogen Ceratocystis albifundus in South Africa. Forest Pathology, 40, pp 500-509, Full Text

Krokene P, Roux J, Solheim H, Wingfield MJ: 2010. Pathogenicity of Ceratocystis resinifera to Norway spruce. Forest Pathology, 40, pp 458-464.

Chungu D, Muimba-Kankolongo A, Wingfield MJ, Roux J: 2010. Identification of fungal pathogens occurring in eucalypt and pine plantations in Zambia by comparing DNA sequences. Forestry, 83 (5), pp 507-515, Full Text

Van der Merwe NA, Gryzenhout M, Steenkamp ET, Wingfield BD, Wingfield MJ: 2010. Multigene phylogenetic and population differentiation data confirm the existence of a cryptic species within Chrysoporthe cubensis. Fungal Biology Reviews, 114, pp 966-979, Full Text

Duran A, Gryzenhout M, Drenth A, Slippers B, Ahumada R, Wingfield BD, Wingfield MJ: 2010. AFLP analysis reveals a clonal population of Phytophthora pinifolia in Chile. Fungal Biology Reviews, 114, pp 746-752, Full Text

van der Merwe NA, Gryzenhout M, Steenkamp ET, Wingfield BD, Wingfield MJ: 2010. Multigene phylogenetic and population differentation data confirm the existence of a cryptic species within Chrysoporthe cubensis. Fungal Biology Reviews, 114, pp 966-979, Full Text

Jacobs A, van Wyk PS, Marasas WFO, Wingfield BD, Wingfield MJ, Coutinho TA: 2010. Fusarium ananatum sp. Nov. in theGibberella fujikuroi species complex from pineapples with fruit rot in South Africa. Fungal Biology Reviews, 114, pp 515-527, Full Text

Cheewangkoon R, Groenewald JZ, Verkley GJM, Hyde KD, Wingfield MJ, Gryzenhout M, Summerell BA, Denman S, Toanun C, Crous PW: 2010. Re-evaluation of Cryptosporiopsis eucalypti and Cryptosporiopsis-like species occurring on Eucalyptus leaves. Fungal Diversity, 44, pp 89-105, Full Text

Paciura D, Zhou XD, de Beer ZW, Jacobs K, Ye H, Wingfield MJ: 2010. Characterisation of synnematous bark beetle-associated fungi from China, including Graphium carbonarium sp. nov.. Fungal Diversity, 40, pp 75-88, Full Text

H

Malerczyk C, Nel LH, Gniel D, Blumberg L: 2010. Rabies in South Africa and the FIFA Soccer World Cup: travelers awareness for an endemic but neglected disease.. Human Vaccines, 6 (5), pp 385-389, Full Text

I

Brady C L, Venter SN, Cleenwerck I, Vandemeulebroecke K, de Vos P, Coutinho TA: 2010. Transfer of Pantoea citrea, Pantoea punctata and Pantoea terrea to the genus Tatumella emend. as Tatumella citrea comb. Nov. Tatumella punctata comb nov and Tatumella terrea comb nov and description of Tatumella morbirosei sp. Nov.. International Journal of Systematic and Evolutionary Microbiology, 60, pp 484-494.

Brady C L, Cleenwerck I, Venter SN, Engelbeen K, de Vos P, Coutinho TA: 2010. Emended description of the genus Pantoea description of four species from human clinical samples Pantoea septica. International Journal of Systematic and Evolutionary Microbiology, 60, pp 2430-2440.

J

Arrebola E, Jacobs R, Korsten L: 2010. Iturin A is the principal inhibitor in the biocontrol activity of Bacillus amyloliquefaciens PPCB004 against prostharvest fungal pathogens. Journal of Applied Microbiology, 108 (2) / Feb, pp 386-395.

De Maayer P, Chan WY, Venter SN, Toth IK, Birch P, Joubert F, Coutinho TA: 2010. Genome Sequence of Pantoea ananatis LMG20103, the Causative Agent of Eucalyptus Blight and Dieback. Journal of Bacteriology, 192 (11) / June, pp 2936-2937, Full Text

Coertse J, Weyer J, Nel LH, Markotter W: 2010. Improved PCR methods for detection of African rabies and rabies related lyssaviruses.. Journal of Clinical Microbiology, 48 (11) / Nov, pp 3949-3955, Full Text

Collignon S, Korsten L: 2010. Attachment and Colonization by Escherichia coli 0157 H7 Listeria monocytogenes Salmonella enterica subsp enterica serovar Typhimurium and Staphylococcus aureus. Journal of Food Protection, 73 (7) / February, pp 1247-1256.

de Reuck K, Sivakumar D, Korsten L: 2010. Effect of passive and active modified atmosphere packaging on quality retention of two cultivars of litichi (Litchi chinensissonn). Journal of Food Quality, 33, pp 337-351.

Echeverri-Molina D, Santolamazza-Carbone S: 2010. Toxicity of synthetic and biological insecticides against adults of the Eucalyptus snout-beetle Gonipterusscutellatus Gyllenhal (Coleoptera: Curculionidae). Journal of Pest Science, 83, pp 297-305.

M

Perez G, Slippers B, Wingfield BD, Hunter GC, Wingfield MJ: 2010. Micro- and macrospatial scale analyses illustrates mixed mating strategies and extensive geneflow in populations of an invasive haploid pathogen. Molecular Ecology, 19 (9), pp 1801-1813, Full Text

Van Zuydam NR, Paciura D, Jacobs K, Wingfield MJ, Coetzee MPA, Wingfield BD: 2010. Barcoding and microcoding using "identiprimers" withLeptographiumspecies. Mycologia, 102 (6), pp 1274-1287, Full Text

Gryzenhout M, Roets F, de Villiers JJR: 2010. Fungal Conservation in Africa. Mycologia Balcanica, In Proceedings of a Special International Meeting: FUNGAL CONSERVATION Science, Infrastructure, and Politics, 1, Bulgarian Mycological Society, pp 53-58.

Zanzot JW, de Beer ZW, Eckhardt LG, Wingfield MJ: 2010. A newOphiostomaspecies from loblolly pine roots in the southeastern United States. Mycological Progress, 9 (3), pp 447-457, Full Text

Chungu D, Gryzenhout M, Muimba-Kankolongo A, Wingfield MJ, Roux J: 2010. Taxomony and pathogenicity of two novelChrysoporthe species fromEucalyptus grandis and Syzygium guineense in Zambia. Mycological Progress, 9, pp 379-393, Full Text

Begoude ADB, Slippers B, Wingfield MJ, Roux J: 2010. Botryosphaeriaceae associated with< I>Terminalia catappa in Cameroon, South Africa and Madagascar. Mycological Progress, 9 (1) / Mar, pp 101-123, Full Text

Grobbelaar JW, de Beer ZW, Bloomer P, Wingfield MJ, Wingfield BD: 2010. Ophiostoma tsotsisp. nov., A Wound-infesting Fungus of Hardwood Trees in Africa. Mycopathologia, 169, pp 413-423, Full Text

Tarigan M, Van Wyk M, Roux J, Tjahjono B, Wingfield MJ: 2010. Three new Ceratocystisspp. In theCeratocystis moniliformiscomplex from wounds onAcacia mangiumand A.crassicarpa. Mycoscience, 51 (1), pp 53-67, Full Text

Marincowitz S, Gryzenhout M, Wingfield MJ: 2010. New and rare coelomycetes with appendage-bearing conidia from Pondoland, South Africa. Mycotaxon, 111 / Jan/March, pp 309-322, Full Text

O

Dungu B, Brett B, MacDonald R, Deville S, Dupuis L, Theron J, Bragg RR: 2010. Study on the efficacy and safety of different antigens and oil formulations of infectious coryza vaccines containing an NAD-independent strain ofAvibacterium paragallinarum. Onderstepoort Journal of Veterinary Research, 76 (3), pp 299-309, Full Text

P

Roets F, Wingfield BD, de Beer ZW, Wingfield MJ, Dreyer LL: 2010. Two new Ophiostoma species fromProtea caffrain Zambia. Persoonia, 24, pp 18-28, Full Text

Lombard L, Zhou XD, Crous PW, Wingfield BD, Wingfield MJ: 2010. Calonectriaspecies associated with cutting rot ofEucalyptus. Persoonia, 24 / June, pp 1-11, Full Text

Linnakoski R, de Beer ZW, Ahtiainen J, Sidorov E, Niemela P, Pappinen A, Wingfield MJ: 2010. Ophiostoma spp. associated with pine- and spruce-infesting bark beetles in Finland and Russia. Persoonia, 25, pp 72-93.

Cruywagen EM, de Beer ZW, Roux J, Wingfield MJ: 2010. Three new Graphium species from baobab trees in South Africa and Madagascar. Persoonia, 25, pp 61-71.

Paciura D, de Beer ZW, Jacobs K, Zhou XD, Ye H, Wingfield MJ: 2010. Eight new Leptographium species associated with tree-infesting bark beetles in China. Persoonia, 25, pp 94-108.

Lamprecht RL, Kasdorf GGF, Stiller M, Staples SM, Nel LH, Pietersen G: 2010. Soybean blotchy mosaic virus, a New Cytorhabdovirus Found in South Africa.. Plant Disease, 94 (11) / Nov, pp 1348-1354, Full Text

Ngadze E, Coutinho TA, van der Waals (Smith) JE: 2010. First Report of Soft Rot of Potatoes Caused byDickeya dadantii in Zimbabwe. Plant Disease, 94 (10) / Oct, p. 1263.2.

Pietersen G, Arrebola E, Breytenbach JHJ, Korsten L, le Roux HF, la Grange H, Lopes A, Meyer JB, Pretorius MC, Schwerdtfeger M, Van Vuuren SP, Yamamoto P: 2010. A Survey for Candidatus Liberibacter Species in South Africa Confirms the Presence of Only Ca. L. africanus in Commercial Citrus. Plant Disease, 94 (2), pp 244-249, Full Text

Chen SF, Gryzenhout M, Roux J, Xie YJ, Wingfield MJ, Zhou XD: 2010. Identification and Pathogenicity ofChrysoporthe cubensisonEucalyptusandSyzygiumspp. In South China. Plant Disease, 94 (9) / Sept, pp 1143-1150, Full Text

Reeve R, Blignaut B, Esterhuysen JJ, Opperman PA, Matthews L, Fry EE, De Beer TAP, Theron J, Rieder E, Vosloo W, Oneill HG, Haydon DT, Maree FF: 2010. Sequence-Based Prediction for Vaccine Strain Selection and Identification of Antigenic Variability in Foot-and-Mouth Disease Virus. PLoS Computational Biology, 6 (12), p. e1001027, Full Text

Hanekom E, Sivakumar D, Naude Y, Rohwer EG, Korsten L: 2010. Influence of postharvest treatments on visual appearance, sensory analysis and aroma volatile compounds of 'Mauritius' litchi fruit during storage. Postharvest Biology and Technology, 57, pp 155-161.

S

Siyoum N, Surridge AKJ, Korsten L: 2010. Bacterial profiling of casing materials for white button muchrooms (Agaricus Bisporus) using denaturing gradient gel electrophoresis. South African Journal of Science, 106 (9/10), pp 1-6, Full Text

Visser M, Gordon TJ, Fourie G, Viljoen A, Viljoen A: 2010. Characterisation of South African isolates of Fusarium oxysporum f.sp. cubense from Cavendish bananas. South African Journal of Science, 106 (3/4), pp 1-6.

Adeleke R, Cloete E, Khasa D: 2010. Isolation and identification of iron ore-solubilising fungus. South African Journal of Science, 106 (9/10), pp 1-6.

Van Wyk M, Heath RN, Tarigan M, Vermeulen M, Wingfield MJ: 2010. Comparison of procedures to evaluate the pathogenicity ofCeratocystis fimbriata sensu latoisolates fromEucalyptusin South Africa. Southern Forests: A Journal of Forest Science (Southern Hemisphere Forestry Journal), 72 (2), pp 57-62, Full Text

Mehl JWM, Geldenhuys C, Roux J, Wingfield MJ: 2010. Die-back of kiaat (Pterocarpus angolensis) in southern Africa : a cause for concern?. Southern Forests: A Journal of Forest Science (Southern Hemisphere Forestry Journal), 72 (3), pp 121-132.

Lombard L, Crous PW, Wingfield BD, Wingfield MJ: 2010. Phylogeny and systematics of the genusCalonectria. Studies in Mycology, 66 (1), pp 31-69, Full Text

Lombard L, Crous PW, Wingfield BD, Wingfield MJ: 2010. Species concepts inCalonectria (Cylindrocladium). Studies in Mycology, 66 (1), pp 1-13, Full Text

Lombard L, Crous PW, Wingfield BD, Wingfield MJ: 2010. Multigene phylogeny and mating tests reveal three cryptic species related toCalonectria pauciramosa. Studies in Mycology, 66 (1), pp 15-30, Full Text

Brady C, Denman S, Kirk S, Venter SN, Rodriquez-Palenzuela P, Coutinho TA: 2010. Description ofGibbsiella quercinecans gen. nov., sp. Nov., associated with Acute Oak Decline. Systematic and Applied Microbiology, 33, pp 444-450.

V

Kuzmin IV, Mayer Dr, Niezgoda M, Markotter W, Agwanda B, Breiman RF, Rupprecht CE: 2010. Shimoni bat virus, a new representative of the Lyssavirus genus. Virus Research, 149, pp 197-210.

Van Zyl N, Markotter W, Nel LH: 2010. Evolutionary history of African mongoose rabies.. Virus Research, 150, pp 93-102.

W

Shikongo-Nambabi MNNN, Kachigunda B, Venter SN: 2010. Evaulation of oxidising disinfectants to controlVibrio biofilms in treated seawater used for fish processing. Water SA, 36 (3) / Apr, pp 215-220, Full Text

Hassan AI, Labuschagne N: 2010. Root colonization and growth enhancement in wheat and tomato by rhizobacteria isolated from the rhizoplane of grasses.. World Journal of Microbiology & Biotechnology, 26 (10), pp 1837-1846.

Adeleke R, Cloete TE, Bertrand A, Khasa D: 2010. Mobilisation of potassium and phosphorus from iron ore by ectomycorrhizal fungi. World Journal of Microbiology & Biotechnology, 26, pp 1901-1913.